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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
Assay category
123
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
41
August, 2017
26
December, 2017
26
May, 2021
16
February, 2018
14
August, 2021
Available data
85
bam
84
bed narrowPeak
84
bigWig
71
fastq
26
tagAlign
14
bigBed narrowPeak
8
bed bed3+
Organism
123
Homo sapiens
Biosample type
615
tissue
247
primary cell
123
in vitro differentiated cells
103
cell line
2
stem cell
Organ
41
connective tissue
17
epithelium
14
liver
12
embryo
1
pancreas
Project
123
AMP
Genome assembly (visualization)
84
GRCh38
83
hg19
Lab
98
AMP-T2D consortium
25
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
in vitro differentiated cells
adipocyte
41
embryonic stem cell
27
hepatocyte
14
neural progenitor cell
14
pancreatic endoderm
10
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