Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
4
Hi-C
2
Capture-C
2
pCHi-C
Assay category
25
DNA accessibility
4
3D chromatin structure
Date released
12
February, 2023
5
May, 2021
4
August, 2021
4
February, 2021
4
March, 2020
4
October, 2019
Available data
12
bigWig
7
bed bedgraph
6
bed bed3+
6
bedpe bed3+
5
bed bed3
4
bed narrowPeak
4
hic
3
txt
2
bigBed narrowPeak
2
ibed
Organism
33
Homo sapiens
Biosample type
132
tissue
110
primary cell
71
cell line
33
in vitro differentiated cells
Organ
19
connective tissue
Project
33
AMP
Genome assembly (visualization)
297
hg19
GRCh38
4
hg18
Lab
21
AMP-T2D consortium
7
Struan F.A. Grant, CHOP
5
Kyle Gaulton, UCSD
Audit category:
9
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
33 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
Capture-C
pCHi-C
in vitro differentiated cells
adipocyte
8
1
embryonic stem cell
6
chondrocyte
5
cardiomyocytes (cardiac muscle cell)
2
1
immature adipocyte
2
lymphocyte of B lineage (iPSC)
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac precursors (cardiac muscle cell)
1
neuron cell of Hypothalamus (neuron)
1
preadipocyte
1
See all biosamples
Download