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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
Assay category
57
DNA binding
Target of assay
114
histone
114
histone modification
57
broad histone mark
56
narrow histone mark
49
transcription factor
38
control
11
RNA binding protein
3
chromatin remodeller
Date released
20
August, 2017
12
December, 2017
10
May, 2021
8
February, 2018
7
August, 2021
Available data
38
bam
38
bed narrowPeak
38
bigWig
32
fastq
14
tagAlign
7
bigBed narrowPeak
5
bed bed3+
Organism
57
Homo sapiens
Biosample type
303
tissue
122
primary cell
56
in vitro differentiated cells
cell line
1
stem cell
Organ
20
connective tissue
7
epithelium
7
liver
4
embryo
Project
57
AMP
Genome assembly (visualization)
38
GRCh38
37
hg19
Lab
47
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
6
inconsistent control read length
biosample_type!
cell line
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
in vitro differentiated cells
adipocyte
20
embryonic stem cell
11
hepatocyte
7
neural progenitor cell
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
stem cell
hESC
1
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