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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
Assay category
49
DNA binding
Target of assay
100
histone
100
histone modification
50
narrow histone mark
49
broad histone mark
47
transcription factor
37
control
9
RNA binding protein
2
chromatin remodeller
Date released
20
August, 2017
10
May, 2021
8
February, 2018
7
August, 2021
4
December, 2017
Available data
37
bam
37
bed narrowPeak
37
bigWig
31
fastq
14
tagAlign
bigBed narrowPeak
4
bed bed3+
Organism
49
Homo sapiens
Biosample type
101
primary cell
99
tissue
49
in vitro differentiated cells
cell line
1
stem cell
Organ
20
connective tissue
4
embryo
Project
49
AMP
Genome assembly (visualization)
30
GRCh38
29
hg19
Lab
39
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
5
inconsistent control read length
biosample_type!
cell line
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
in vitro differentiated cells
adipocyte
20
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
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