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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
22
total RNA-seq
4
ATAC-seq
1
DNase-seq
Assay category
67
DNA binding
22
Transcription
5
DNA accessibility
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
76
bam
70
bigWig
54
fastq
43
bed narrowPeak
22
tsv
14
tagAlign
7
bed bed3+
4
bed bedgraph
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
94
Homo sapiens
Biosample type
829
tissue
107
primary cell
96
cell line
94
in vitro differentiated cells
Organ
76
connective tissue
Project
94
AMP
Genome assembly (visualization)
75
hg19
71
GRCh38
Lab
94
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
4
4
1
cardiac precursors (cardiac muscle cell)
18
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