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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
5
ATAC-seq
1
DNase-seq
Assay category
67
DNA binding
6
DNA accessibility
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
59
bam
54
fastq
48
bed narrowPeak
48
bigWig
14
tagAlign
7
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
73
Homo sapiens
Biosample type
324
tissue
73
in vitro differentiated cells
59
primary cell
16
cell line
Organ
68
connective tissue
Project
73
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
73
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
February, 2021
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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