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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
Assay category
46
DNA binding
Target of assay
100
histone
100
histone modification
52
broad histone mark
47
narrow histone mark
46
transcription factor
30
control
11
RNA binding protein
3
chromatin remodeller
Date released
22
August, 2017
16
May, 2021
8
December, 2017
Available data
34
bam
34
bigWig
30
fastq
29
bed narrowPeak
6
bed bed3+
4
tagAlign
2
bigBed narrowPeak
Organism
46
Homo sapiens
Biosample type
361
cell line
89
tissue
46
in vitro differentiated cells
10
primary cell
Organ
22
connective tissue
embryo
3
epithelium
2
liver
1
pancreas
Project
46
AMP
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
34
AMP-T2D consortium
12
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
9
inconsistent control read length
organ_slims!
embryo
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
embryonic stem cell
12
cardiomyocytes
3
Posterior foregut
2
definitive endodermal cell
2
hepatocyte
2
primitive gut cell
2
pancreatic PP cell
1
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