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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
Assay category
67
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
24
August, 2017
15
May, 2021
13
December, 2017
8
February, 2018
7
August, 2021
Available data
43
bam
43
bed narrowPeak
43
bigWig
37
fastq
14
tagAlign
9
bigBed narrowPeak
4
bed bed3+
Organism
67
Homo sapiens
Biosample type
306
tissue
132
primary cell
84
cell line
67
in vitro differentiated cells
1
stem cell
Organ
24
connective tissue
9
epithelium
9
liver
4
embryo
Project
67
AMP
Genome assembly (visualization)
43
GRCh38
42
hg19
Lab
52
AMP-T2D consortium
15
Kyle Gaulton, UCSD
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
in vitro differentiated cells
adipocyte
24
embryonic stem cell
16
hepatocyte
9
neural progenitor cell
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
posterior foregut
1
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