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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
91
histone
91
histone modification
46
broad histone mark
44
narrow histone mark
33
transcription factor
31
control
6
RNA binding protein
3
chromatin remodeller
Date released
37
August, 2017
24
December, 2017
May, 2021
16
February, 2018
14
August, 2021
Available data
78
bam
77
bed narrowPeak
77
bigWig
65
fastq
25
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
91
Homo sapiens
Biosample type
592
tissue
119
primary cell
91
in vitro differentiated cells
37
cell line
2
stem cell
Organ
37
connective tissue
14
epithelium
12
embryo
12
liver
Project
91
AMP
Genome assembly (visualization)
77
GRCh38
76
hg19
Lab
91
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
month_released!
May, 2021
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
in vitro differentiated cells
adipocyte
37
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
2
Posterior foregut
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
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