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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
96
histone
96
histone modification
49
transcription factor
48
broad histone mark
47
narrow histone mark
29
control
11
RNA binding protein
3
chromatin remodeller
Date released
16
August, 2017
13
December, 2017
11
May, 2021
February, 2018
7
August, 2021
Available data
33
bam
32
bed narrowPeak
32
bigWig
25
fastq
12
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
47
Homo sapiens
Biosample type
309
tissue
115
primary cell
47
in vitro differentiated cells
19
cell line
1
stem cell
Organ
16
connective tissue
8
epithelium
5
embryo
5
liver
1
pancreas
Project
47
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
37
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
February, 2018
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
10
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
pancreatic PP cell
1
primitive gut cell
1
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