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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
Assay category
50
DNA binding
Target of assay
100
histone
100
histone modification
50
narrow histone mark
49
broad histone mark
47
transcription factor
36
control
9
RNA binding protein
2
chromatin remodeller
Date released
16
August, 2017
11
May, 2021
8
December, 2017
8
February, 2018
7
August, 2021
Available data
36
bam
35
bed narrowPeak
35
bigWig
28
fastq
12
tagAlign
4
bed bed3+
Organism
50
Homo sapiens
Biosample type
265
tissue
113
primary cell
50
in vitro differentiated cells
10
cell line
1
stem cell
Organ
16
connective tissue
8
embryo
8
epithelium
liver
1
pancreas
Project
50
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
40
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
liver
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
Hepatic endoderm
2
definitive endodermal cell
2
primitive gut cell
2
Posterior foregut
1
endocrine cell
1
pancreatic PP cell
1
posterior foregut
1
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