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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
111
ChIP-seq
Assay category
111
DNA binding
Target of assay
112
histone
112
histone modification
56
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
36
August, 2017
24
December, 2017
21
May, 2021
16
February, 2018
14
August, 2021
Available data
78
bam
77
bed narrowPeak
77
bigWig
64
fastq
26
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
111
Homo sapiens
Biosample type
592
tissue
237
primary cell
111
in vitro differentiated cells
38
cell line
2
stem cell
Organ
36
connective tissue
15
epithelium
12
embryo
12
liver
1
pancreas
Project
111
AMP
Genome assembly (visualization)
77
GRCh38
76
hg19
Lab
91
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
in vitro differentiated cells
adipocyte
36
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
2
Posterior foregut
2
endocrine cell
2
posterior foregut
2
pancreatic PP cell
1
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