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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ATAC-seq
29
DNase-seq
Assay category
252
Transcription
242
DNA binding
113
DNA accessibility
Date released
45
May, 2020
24
June, 2019
14
September, 2018
13
May, 2021
5
August, 2017
5
September, 2017
4
October, 2019
2
November, 2020
1
February, 2021
Available data
114
bam
108
bigWig
69
bed narrowPeak
60
fastq
60
zippedFastqFolder
52
bigBed narrowPeak
28
bed broadPeak
28
bigBed broadPeak
27
bed bed3+
12
tsv
1
bed bed3
tar
Organism
113
Homo sapiens
Biosample type
245
tissue
113
primary cell
18
in vitro differentiated cells
12
cell line
Organ
39
epithelium
22
pancreas
10
kidney
8
connective tissue
6
vasculature
5
brain
4
blood vessel
3
heart
3
liver
2
vein
1
eye
1
musculature of body
Project
113
AMP
Genome assembly (visualization)
106
hg19
66
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
files.file_type!
tar
BIOSAMPLE
ASSAY
113 results
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ATAC-seq
DNase-seq
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
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