Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ATAC-seq
18
DNase-seq
1
FAIRE-seq
Assay category
163
Transcription
92
DNA binding
91
DNA accessibility
53
DNA methylation
7
3D chromatin structure
Date released
39
May, 2022
14
June, 2019
14
September, 2018
7
August, 2020
6
October, 2019
5
September, 2017
3
August, 2017
3
September, 2020
Available data
49
bigWig
40
bam
40
bed narrowPeak
39
bigBed narrowPeak
39
zippedFastqFolder
32
fastq
16
bed bed3+
16
bed broadPeak
16
bigBed broadPeak
1
tar
Organism
91
Homo sapiens
Biosample type
91
primary cell
20
cell line
12
tissue
Organ
91
epithelium
71
pancreas
12
kidney
8
blood
8
bodily fluid
8
connective tissue
7
vasculature
5
blood vessel
5
brain
3
heart
3
liver
3
vein
1
eye
1
musculature of body
Project
49
HPAP
42
AMP
Genome assembly (visualization)
49
GRCh38
34
hg19
Lab
49
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
1
+ See 13 more…
See all biosamples
Download