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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
57
DNA methylation
Date released
41
May, 2022
9
July, 2019
6
February, 2021
1
August, 2017
Available data
41
zippedFastqFolder
10
bed bedMethyl
10
bigBed bedMethyl
7
fastq
6
tsv
Organism
57
Homo sapiens
Biosample type
57
primary cell
38
tissue
1
cell line
Organ
53
epithelium
47
pancreas
3
kidney
1
brain
1
connective tissue
1
eye
1
heart
1
liver
1
musculature of body
1
vasculature
Project
47
HPAP
10
AMP
Genome assembly (visualization)
10
hg19
Lab
47
Klaus Kaestner, Upenn
10
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
57 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
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