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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
47
DNA methylation
1
DNA accessibility
Date released
41
May, 2022
6
February, 2021
1
October, 2019
Available data
41
zippedFastqFolder
6
fastq
6
tsv
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tar
Organism
48
Homo sapiens
Biosample type
48
primary cell
31
tissue
1
cell line
Organ
48
epithelium
47
pancreas
1
blood vessel
1
vasculature
1
vein
Project
47
HPAP
1
AMP
Genome assembly (visualization)
1
hg19
Lab
47
Klaus Kaestner, Upenn
1
AMP-T2D consortium
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
48 results
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WGBS
FAIRE-seq
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
endothelial cell of umbilical vein
1
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