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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1284
total RNA-seq
1146
ChIP-seq
460
ATAC-seq
361
single cell RNA-seq
209
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
42
pCHi-C
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNAme array
Date released
20
March, 2020
17
May, 2021
4
October, 2019
1
February, 2021
Available data
20
tsv
1
bam
1
bed bed3+
Organism
42
Homo sapiens
Biosample type
25
tissue
17
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
4
eye
3
connective tissue
3
heart
2
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
25
AMP
17
T1D
Genome assembly (visualization)
1
hg19
Lab
25
AMP-T2D consortium
17
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
42 results
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pCHi-C
tissue
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
adrenal gland
1
+ See 16 more…
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
+ See 11 more…
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