Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
187
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
128
fastq
100
bam
100
bigWig
100
tsv
52
zippedFastqFolder
2
csv
Organism
187
Homo sapiens
Biosample type
187
primary cell
174
tissue
2
in vitro differentiated cells
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
102
AMP
85
HPAP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
102
AMP-T2D consortium
85
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
187 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
+ See 14 more…
See all biosamples
Download