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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
254
ChIP-seq
243
total RNA-seq
188
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
47
WGBS
28
DNase-seq
16
pCHi-C
10
Hi-C
8
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
180
Transcription
Target of assay
3
control
Date released
43
April, 2018
42
July, 2018
40
September, 2020
33
May, 2022
12
February, 2021
3
August, 2018
3
July, 2019
2
June, 2018
1
November, 2018
1
September, 2018
Available data
121
fastq
93
bam
93
bigWig
93
tsv
52
zippedFastqFolder
2
csv
Organism
180
Homo sapiens
Biosample type
180
primary cell
174
tissue
Organ
69
epithelium
69
pancreas
4
connective tissue
3
brain
Project
95
AMP
85
HPAP
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
95
AMP-T2D consortium
85
Klaus Kaestner, Upenn
Audit category:
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BIOSAMPLE
ASSAY
180 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic acinar cell
11
pancreatic delta cell
11
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