Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
243
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
28
DNase-seq
17
pCHi-C
10
Hi-C
9
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
243
Transcription
Date released
76
February, 2023
55
May, 2021
47
May, 2020
26
September, 2018
16
September, 2020
9
July, 2019
5
December, 2019
4
November, 2020
2
October, 2018
2
October, 2019
1
February, 2021
Available data
148
bigWig
146
bam
146
tsv
120
fastq
2
bed bed3+
Organism
243
Homo sapiens
Biosample type
1022
tissue
243
primary cell
135
in vitro differentiated cells
61
cell line
Organ
93
epithelium
81
pancreas
10
connective tissue
6
kidney
5
liver
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
96
T1D
92
HPAP
55
AMP
Genome assembly (visualization)
148
hg19
146
GRCh38
Lab
98
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
53
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
243 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
primary cell
monocyte
54
pancreatic alpha cell
52
exocrine cell
39
pancreatic beta cell
21
hepatocyte
5
+ See 41 more…
See all biosamples
Download