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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ATAC-seq
95
total RNA-seq
87
single cell RNA-seq
56
snATAC-seq
47
WGBS
32
ChIP-seq
16
pCHi-C
9
DNase-seq
1
DNAme array
1
Hi-C
Assay category
116
DNA accessibility
Date released
55
May, 2020
39
May, 2022
12
February, 2023
7
August, 2020
3
September, 2020
Available data
39
zippedFastqFolder
12
tsv
10
bigWig
10
fastq
Organism
116
Homo sapiens
Biosample type
138
tissue
116
primary cell
16
cell line
Organ
49
epithelium
49
pancreas
Project
67
AMP
49
HPAP
Genome assembly (visualization)
hg19
49
GRCh38
Lab
67
AMP-T2D consortium
49
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
116 results
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ATAC-seq
primary cell
pancreatic alpha cell
29
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
pancreatic beta cell
16
macrophage
11
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