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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
4
DNase-seq
2
ATAC-seq
2
total RNA-seq
1
FAIRE-seq
Assay category
24
DNA binding
7
DNA accessibility
2
Transcription
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
July, 2018
43
April, 2018
33
October, 2019
31
July, 2019
21
February, 2021
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
31
bam
23
bigWig
21
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
tar
Organism
33
Homo sapiens
Biosample type
242
tissue
33
primary cell
30
cell line
8
in vitro differentiated cells
Organ
32
epithelium
20
blood vessel
20
vasculature
20
vein
11
kidney
1
liver
Project
33
AMP
Genome assembly (visualization)
25
hg19
22
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Heart fetal (cardiac muscle cell)
1
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