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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
Assay category
33
DNA binding
Target of assay
239
histone
239
histone modification
123
broad histone mark
116
narrow histone mark
33
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
8
June, 2019
July, 2019
3
May, 2021
3
November, 2017
3
October, 2019
1
August, 2021
1
December, 2017
1
May, 2019
Available data
30
bam
17
fastq
7
bigWig
2
tagAlign
1
bed bed3+
Organism
33
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
32
primary cell
1
stem cell
Organ
21
epithelium
12
pancreas
4
vasculature
3
blood vessel
3
brain
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
1
eye
1
liver
Project
33
AMP
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
30
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
endothelial cell of umbilical vein
2
+ See 12 more…
stem cell
hESC
1
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