Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
ChIP-seq
Assay category
116
DNA binding
Target of assay
239
histone
239
histone modification
123
broad histone mark
116
narrow histone mark
33
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
52
May, 2021
22
August, 2017
15
September, 2018
11
June, 2019
9
October, 2019
3
November, 2017
2
August, 2021
1
December, 2017
1
May, 2019
Available data
113
bigWig
105
bed narrowPeak
104
bam
47
tagAlign
41
fastq
26
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
3
bed bed3+
Organism
116
Homo sapiens
Biosample type
324
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
35
epithelium
31
pancreas
8
vasculature
7
blood vessel
6
vein
5
kidney
4
connective tissue
4
musculature of body
3
brain
2
heart
2
liver
1
eye
Project
76
AMP
40
T1D
Genome assembly (visualization)
113
hg19
103
GRCh38
Lab
66
AMP-T2D consortium
50
Kyle Gaulton, UCSD
Audit category:
9
inconsistent ontology term
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
month_released!
July, 2019
BIOSAMPLE
ASSAY
116 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
monocyte
41
pancreatic endocrine cell
12
CD8-positive, alpha-beta T cell
10
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
+ See 17 more…
stem cell
hESC
1
See all biosamples
Download