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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
40
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
27
histone
27
histone modification
17
narrow histone mark
13
control
10
broad histone mark
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
45
August, 2017
43
April, 2018
31
July, 2019
31
June, 2019
30
October, 2019
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
November, 2020
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
58
bam
58
fastq
46
bigWig
33
bed narrowPeak
19
bigBed narrowPeak
14
bed broadPeak
bigBed broadPeak
12
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
45
Homo sapiens
Biosample type
284
tissue
67
in vitro differentiated cells
45
primary cell
Organ
41
pancreas
29
epithelium
Project
45
AMP
Genome assembly (visualization)
33
hg19
30
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
skeletal muscle myoblast
2
1
1
pancreatic acinar cell
1
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