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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
3
ATAC-seq
2
DNase-seq
Assay category
28
DNA binding
5
DNA accessibility
Target of assay
26
histone
26
histone modification
14
narrow histone mark
12
broad histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
127
May, 2021
47
June, 2019
46
September, 2018
33
August, 2017
21
October, 2019
6
November, 2017
5
September, 2017
4
May, 2019
3
August, 2021
2
November, 2020
1
February, 2021
Available data
58
bam
58
fastq
46
bigWig
33
bed narrowPeak
19
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
12
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
33
Homo sapiens
Biosample type
66
tissue
43
in vitro differentiated cells
33
primary cell
Organ
17
epithelium
17
pancreas
Project
33
AMP
Genome assembly (visualization)
33
hg19
30
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
ATAC-seq
DNase-seq
primary cell
skeletal muscle myoblast
14
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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