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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
7
3D chromatin structure
Date released
4
July, 2019
3
October, 2022
Available data
613
bigWig
609
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
7
Homo sapiens
Biosample type
7
primary cell
1
cell line
Organ
5
epithelium
3
brain
3
pancreas
2
blood vessel
2
vasculature
1
connective tissue
1
liver
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
pancreatic acinar cell
1
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