Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
158
ChIP-seq
100
single cell RNA-seq
84
ATAC-seq
54
total RNA-seq
29
DNase-seq
2
small RNA-seq
1
FAIRE-seq
1
pCHi-C
Assay category
84
DNA accessibility
Date released
45
May, 2020
14
September, 2018
13
May, 2021
5
September, 2017
3
August, 2017
2
October, 2019
1
February, 2021
1
November, 2020
Available data
84
bam
78
bigWig
39
bed narrowPeak
39
zippedFastqFolder
32
fastq
22
bigBed narrowPeak
12
tsv
1
bed bed3
Organism
84
Homo sapiens
Biosample type
84
primary cell
46
tissue
17
in vitro differentiated cells
10
cell line
Organ
23
epithelium
22
pancreas
2
connective tissue
1
liver
Project
84
AMP
Genome assembly (visualization)
84
hg19
39
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
84 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 27 more…
See all biosamples
Download