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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
4
DNase-seq
2
total RNA-seq
1
FAIRE-seq
Assay category
20
DNA binding
5
DNA accessibility
2
Transcription
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
20
October, 2019
3
November, 2017
2
July, 2019
2
June, 2019
Available data
27
bam
24
bigWig
17
bed narrowPeak
17
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
3
fastq
2
hdf5
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
27
Homo sapiens
Biosample type
87
tissue
66
cell line
27
primary cell
Organ
242
epithelium
194
pancreas
36
connective tissue
32
vasculature
31
kidney
27
blood vessel
20
vein
17
brain
13
musculature of body
12
heart
12
liver
4
eye
2
adipose tissue
2
artery
1
pericardium
Project
27
AMP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
27
AMP-T2D consortium
month_released!
May, 2022
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
DNase-seq
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
brain microvascular endothelial cell
3
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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