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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
243
total RNA-seq
160
ATAC-seq
154
single cell RNA-seq
35
snATAC-seq
30
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
6
WGBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
30
DNA accessibility
Date released
24
June, 2019
4
October, 2019
2
August, 2017
November, 2020
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
27
bed broadPeak
27
bigBed broadPeak
26
bed bed3+
1
fastq
Organism
30
Homo sapiens
Biosample type
178
tissue
30
primary cell
2
cell line
1
in vitro differentiated cells
Organ
18
epithelium
12
kidney
6
vasculature
5
brain
5
connective tissue
4
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
Project
30
AMP
Genome assembly (visualization)
26
GRCh38
21
hg19
Lab
30
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
May, 2022
November, 2020
BIOSAMPLE
ASSAY
30 results
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DNase-seq
primary cell
cardiac fibroblast
3
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
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