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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
total RNA-seq
13
ATAC-seq
1
DNase-seq
Assay category
80
Transcription
14
DNA accessibility
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
76
fastq
16
tsv
6
bam
5
bigWig
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
94
Homo sapiens
Biosample type
99
tissue
94
primary cell
16
in vitro differentiated cells
12
cell line
Organ
37
epithelium
37
pancreas
6
connective tissue
Project
76
HPAP
18
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
76
Klaus Kaestner, Upenn
18
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
94 results
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total RNA-seq
ATAC-seq
DNase-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
osteoblast
4
1
1
gabaergic neuron
3
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