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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
ATAC-seq
2
DNase-seq
1
Hi-C
Assay category
6
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
3
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
134
May, 2022
88
February, 2023
57
May, 2020
56
September, 2020
46
February, 2021
35
May, 2021
13
August, 2017
11
October, 2019
9
July, 2019
8
January, 2021
8
June, 2019
3
October, 2022
1
August, 2021
1
March, 2020
1
March, 2023
1
May, 2019
1
November, 2018
1
November, 2020
1
September, 2018
Available data
31
bam
bigWig
21
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
11
Homo sapiens
Biosample type
82
tissue
11
primary cell
10
cell line
4
in vitro differentiated cells
Organ
10
epithelium
6
blood vessel
6
vasculature
6
vein
3
kidney
1
liver
Project
11
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
files.file_type!
bigWig
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
ATAC-seq
DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
5
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
epithelial cell of proximal tubule
1
kidney glomerular epithelial cell
1
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