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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
26
total RNA-seq
24
DNase-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
63
DNA binding
38
DNA accessibility
27
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
127
bam
119
bigWig
93
bed narrowPeak
73
fastq
61
bigBed narrowPeak
26
tsv
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
1
csv
Organism
128
Homo sapiens
Biosample type
163
tissue
128
primary cell
Organ
81
epithelium
72
pancreas
17
connective tissue
13
kidney
11
musculature of body
8
heart
5
brain
4
eye
4
vasculature
2
blood vessel
2
liver
Project
128
AMP
Genome assembly (visualization)
119
GRCh38
112
hg19
Lab
128
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
128 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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