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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
6
ChIP-seq
Assay category
16
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
14
June, 2019
4
November, 2017
4
October, 2019
Available data
242
bam
238
fastq
231
bigWig
116
tsv
106
bed narrowPeak
80
zippedFastqFolder
61
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
5
hic
4
bedpe bed3+
4
tagAlign
3
cool
2
hdf5
1
tar
Organism
22
Homo sapiens
Biosample type
22
primary cell
Organ
22
epithelium
12
vasculature
11
brain
10
kidney
8
blood vessel
6
connective tissue
4
vein
3
heart
2
liver
1
eye
1
musculature of body
Project
22
AMP
Genome assembly (visualization)
20
GRCh38
16
hg19
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
bone element
BIOSAMPLE
ASSAY
22 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
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