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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
ChIP-seq
154
total RNA-seq
128
ATAC-seq
117
single cell RNA-seq
56
snATAC-seq
17
pCHi-C
13
DNase-seq
4
RRBS
3
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
117
Transcription
Target of assay
3
control
Date released
40
September, 2020
33
May, 2022
15
July, 2018
12
February, 2021
10
April, 2018
3
July, 2019
2
June, 2018
1
November, 2018
1
September, 2018
Available data
62
fastq
52
zippedFastqFolder
30
bam
30
bigWig
30
tsv
2
csv
Organism
117
Homo sapiens
Biosample type
174
tissue
117
primary cell
2
in vitro differentiated cells
Organ
74
pancreas
epithelium
4
connective tissue
3
brain
Project
85
HPAP
32
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
85
Klaus Kaestner, Upenn
32
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
117 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic cell
9
mesenchymal cell
6
pancreatic stellate cell
4
cerebellar granule cell
2
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