Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
28
ChIP-seq
2
DNase-seq
1
pCHi-C
Assay category
47
DNA accessibility
28
DNA binding
Target of assay
27
control
1
RNA binding protein
1
transcription factor
Date released
45
May, 2020
16
August, 2017
8
June, 2019
3
November, 2017
1
August, 2021
1
February, 2021
1
May, 2019
1
October, 2019
Available data
180
fastq
153
zippedFastqFolder
91
bigWig
76
bam
33
bed narrowPeak
18
tsv
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bed3+
4
hdf5
3
bedpe bed3+
3
bigBed narrowPeak
3
cool
3
hic
2
bed broadPeak
2
bigBed broadPeak
2
csv
2
tagAlign
Organism
76
Homo sapiens
Biosample type
204
tissue
119
cell line
76
primary cell
26
in vitro differentiated cells
Organ
27
epithelium
12
pancreas
10
vasculature
9
blood vessel
vein
4
connective tissue
3
brain
3
kidney
2
heart
2
musculature of body
1
eye
1
liver
Project
76
AMP
Genome assembly (visualization)
559
hg19
GRCh38
Lab
76
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
organ_slims!
vein
assembly!
GRCh38
BIOSAMPLE
ASSAY
76 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
2
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 36 more…
See all biosamples
Download