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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
March, 2023
Available data
598
bigWig
589
bam
409
fastq
282
bed narrowPeak
270
tsv
153
zippedFastqFolder
100
tagAlign
96
bigBed narrowPeak
45
bed broadPeak
45
bigBed broadPeak
35
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
4
hdf5
4
hic
3
bedpe bed3+
3
cool
2
csv
1
bed bed3
Organism
4
Homo sapiens
Biosample type
11
tissue
4
in vitro differentiated cells
4
primary cell
2
cell line
Organ
5
epithelium
3
pancreas
2
blood vessel
2
vasculature
vein
Project
3
HPAP
1
ITG
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
1
ITG
Audit category:
3
audit script error
organ_slims!
vein
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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