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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
DNase-seq
2
total RNA-seq
1
ChIP-seq
Assay category
4
DNA accessibility
2
Transcription
1
DNA binding
Target of assay
6
histone
histone modification
3
broad histone mark
3
narrow histone mark
1
control
Date released
147
May, 2020
134
May, 2022
88
February, 2023
88
May, 2021
59
September, 2020
48
February, 2021
48
July, 2018
43
April, 2018
41
September, 2018
36
June, 2019
31
July, 2019
21
August, 2017
8
January, 2021
7
August, 2020
7
October, 2019
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
October, 2022
2
May, 2019
2
October, 2018
1
August, 2021
1
March, 2023
1
November, 2018
Available data
5
bam
2
bed narrowPeak
2
bigWig
2
tsv
Organism
7
Homo sapiens
Biosample type
74
tissue
23
cell line
8
in vitro differentiated cells
7
primary cell
Organ
12
epithelium
6
blood vessel
6
vasculature
vein
5
kidney
1
liver
Project
7
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
7
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vein
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
DNase-seq
total RNA-seq
ChIP-seq
primary cell
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
epithelial cell of proximal tubule
1
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