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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
DNase-seq
2
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
4
DNA binding
2
DNA accessibility
2
DNA methylation
2
Transcription
Target of assay
histone
9
histone modification
5
narrow histone mark
4
broad histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
6
June, 2019
4
July, 2019
Available data
8
bam
5
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
2
tsv
Organism
10
Homo sapiens
Biosample type
111
tissue
10
primary cell
Organ
340
epithelium
288
pancreas
31
connective tissue
26
kidney
20
vasculature
18
brain
15
blood vessel
11
heart
11
liver
8
blood
8
bodily fluid
7
vein
6
musculature of body
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
10
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
retinal pigment epithelial cell
2
1
1
skeletal muscle cell
1
1
1
skeletal muscle satellite cell
1
1
1
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