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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
6
DNA binding
2
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
narrow histone mark
2
control
Date released
7
June, 2019
3
July, 2019
Available data
9
bam
7
bigWig
5
bed narrowPeak
5
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
73
tissue
10
primary cell
Organ
371
epithelium
315
pancreas
35
connective tissue
31
kidney
29
vasculature
24
blood vessel
18
brain
16
vein
12
liver
11
heart
10
musculature of body
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
10
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
5
1
1
skeletal muscle cell
1
1
1
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