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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
3
Hi-C
3
single cell RNA-seq
1
RRBS
Assay category
9
DNA binding
DNA accessibility
3
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
control
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
7
July, 2019
Available data
15
bigWig
12
bam
9
fastq
6
bed broadPeak
6
bed narrowPeak
6
bigBed broadPeak
6
bigBed narrowPeak
3
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
16
Homo sapiens
Biosample type
233
tissue
16
primary cell
Organ
315
epithelium
275
pancreas
31
connective tissue
30
vasculature
26
blood vessel
24
kidney
19
vein
16
brain
13
musculature of body
11
liver
10
heart
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
16
AMP
Genome assembly (visualization)
16
hg19
9
GRCh38
Lab
16
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
Hi-C
single cell RNA-seq
RRBS
primary cell
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
choroid plexus epithelial cell
3
1
cerebellar granule cell
2
Purkinje cell
1
brain pericyte
1
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