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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
ChIP-seq
1
Hi-C
1
RRBS
Assay category
5
Transcription
4
DNA binding
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
1
control
Date released
5
December, 2019
4
August, 2021
2
July, 2019
Available data
9
bam
9
bigWig
5
tsv
4
bed bed3+
4
tagAlign
3
bed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
11
Homo sapiens
Biosample type
400
cell line
336
tissue
15
in vitro differentiated cells
11
primary cell
Organ
315
epithelium
275
pancreas
31
connective tissue
30
vasculature
26
blood vessel
24
kidney
19
vein
16
brain
13
musculature of body
11
liver
10
heart
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
11
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
ChIP-seq
Hi-C
RRBS
primary cell
hepatocyte
5
4
1
endothelial cell of hepatic sinusoid
1
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