Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1284
total RNA-seq
1186
ChIP-seq
460
ATAC-seq
361
single cell RNA-seq
209
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
42
pCHi-C
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNAme array
Assay category
209
DNA accessibility
21
DNA methylation
Date released
187
June, 2019
15
July, 2019
10
August, 2017
9
November, 2018
8
October, 2019
1
November, 2020
Available data
206
bam
206
bed narrowPeak
206
bigBed narrowPeak
206
bigWig
204
bed broadPeak
204
bigBed broadPeak
203
bed bed3+
19
bed bedMethyl
19
bigBed bedMethyl
15
fastq
Organism
230
Homo sapiens
Biosample type
189
tissue
41
primary cell
2
cell line
1
in vitro differentiated cells
Organ
84
kidney
38
musculature of body
36
limb
34
brain
32
heart
24
epithelium
18
ureter
12
vasculature
9
blood vessel
9
connective tissue
9
pancreas
8
liver
5
eye
4
artery
2
adipose tissue
2
nerve
2
vein
1
pericardium
1
spleen
Project
230
AMP
Genome assembly (visualization)
204
GRCh38
202
hg19
Lab
230
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
230 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
RRBS
tissue
heart
18
muscle of arm
17
brain
14
1
kidney
13
1
muscle of leg
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
body of pancreas
4
heart left ventricle
3
1
left renal cortex interstitium
4
left renal pelvis
4
right renal pelvis
4
skeletal muscle tissue
4
liver
2
1
pancreas
2
1
retina
3
right renal cortex interstitium
3
coronary artery
2
frontal cortex
2
islet of Langerhans
1
1
omental fat pad
2
right atrium auricular region
2
right lobe of liver
2
tibial artery
2
tibial nerve
2
Ammon's horn
1
ascending aorta
1
caudate nucleus
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
forelimb muscle
1
globus pallidus
1
heart right ventricle
1
hindlimb muscle
1
inferior parietal cortex
1
left cardiac atrium
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
occipital lobe
1
pericardium
1
pons
1
putamen
1
spleen
1
superior temporal gyrus
1
primary cell
cardiac fibroblast
3
1
kidney tubule cell
3
skeletal muscle myoblast
2
1
cardiac muscle cell
1
1
choroid plexus epithelial cell
1
1
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
1
1
glomerular visceral epithelial cell
2
hepatocyte
1
1
kidney epithelial cell
1
1
kidney glomerular epithelial cell
2
renal cortical epithelial cell
1
1
retinal pigment epithelial cell
1
1
skeletal muscle cell
1
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
glomerular endothelial cell
1
hepatic stellate cell
1
kidney capillary endothelial cell
1
osteoblast
1
smooth muscle cell of the brain vasculature
1
See all biosamples
Download