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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
258
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
17
pCHi-C
10
Hi-C
10
RRBS
3
DNase-seq
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
47
DNA methylation
3
DNA accessibility
Date released
41
May, 2022
6
February, 2021
2
October, 2019
1
August, 2017
Available data
41
zippedFastqFolder
29
bam
29
bed narrowPeak
29
bigBed narrowPeak
29
bigWig
28
bed broadPeak
bigBed broadPeak
27
bed bed3+
7
fastq
6
tsv
Organism
50
Homo sapiens
Biosample type
50
primary cell
29
tissue
2
cell line
Organ
49
epithelium
47
pancreas
2
kidney
Project
47
HPAP
3
AMP
Genome assembly (visualization)
1
hg19
Lab
47
Klaus Kaestner, Upenn
3
AMP-T2D consortium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
50 results
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WGBS
DNase-seq
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
kidney glomerular epithelial cell
1
kidney tubule cell
1
skeletal muscle myoblast
1
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