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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
248
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
17
pCHi-C
10
Hi-C
10
RRBS
7
DNase-seq
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
7
DNA accessibility
Date released
June, 2019
4
October, 2019
2
August, 2017
1
November, 2020
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
4
bed broadPeak
4
bigBed broadPeak
3
bed bed3+
1
fastq
Organism
7
Homo sapiens
Biosample type
15
tissue
7
primary cell
2
cell line
1
in vitro differentiated cells
Organ
4
epithelium
2
blood vessel
2
kidney
2
vasculature
2
vein
1
connective tissue
Project
7
AMP
Genome assembly (visualization)
5
hg19
3
GRCh38
Lab
7
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
7 results
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DNase-seq
primary cell
endothelial cell of umbilical vein
2
skeletal muscle myoblast
2
kidney glomerular epithelial cell
1
kidney tubule cell
1
osteoblast
1
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