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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ATAC-seq
95
total RNA-seq
87
single cell RNA-seq
56
snATAC-seq
47
WGBS
32
ChIP-seq
17
pCHi-C
10
RRBS
6
Hi-C
2
DNase-seq
1
DNAme array
Assay category
6
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
1
March, 2023
1
October, 2019
Available data
6
hic
4
bed bed3+
4
bedpe bed3+
bigWig
4
hdf5
3
cool
Organism
6
Homo sapiens
Biosample type
16
tissue
6
primary cell
4
in vitro differentiated cells
3
cell line
Organ
5
epithelium
3
pancreas
2
blood vessel
2
vasculature
2
vein
Project
3
HPAP
2
AMP
1
ITG
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
ITG
Audit category:
4
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bigWig
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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