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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
Assay category
12
DNA accessibility
Date released
12
February, 2023
Available data
54
bigWig
49
bam
12
tsv
10
bed bedMethyl
10
bigBed bedMethyl
7
bed bed3+
4
fastq
4
hdf5
3
bed narrowPeak
3
bigBed narrowPeak
2
csv
2
hic
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
tar
Organism
12
Homo sapiens
Biosample type
159
tissue
15
cell line
12
primary cell
4
in vitro differentiated cells
4
stem cell
Project
12
AMP
Genome assembly (visualization)
GRCh38
252
hg19
Lab
12
AMP-T2D consortium
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
assembly!
GRCh38
assay_title!
ChIP-seq
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
12 results
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ATAC-seq
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
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