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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
Hi-C
Assay category
8
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
3
control
1
narrow histone mark
Date released
134
May, 2022
102
May, 2020
88
February, 2023
57
May, 2021
56
September, 2020
46
February, 2021
17
August, 2017
13
July, 2019
12
October, 2019
8
January, 2021
8
June, 2019
3
November, 2017
3
October, 2022
1
August, 2021
1
March, 2020
1
May, 2019
1
November, 2018
1
September, 2018
Available data
9
bam
3
bigWig
2
bed broadPeak
2
bigBed broadPeak
1
bed narrowPeak
1
bigBed narrowPeak
1
hic
1
tar
Organism
12
Homo sapiens
Biosample type
81
tissue
12
primary cell
10
cell line
4
in vitro differentiated cells
Organ
12
epithelium
9
blood vessel
9
vasculature
9
vein
3
kidney
Project
12
AMP
Genome assembly (visualization)
26
hg19
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
audit script error
assembly!
GRCh38
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
DNase-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
7
1
1
epithelial cell of proximal tubule
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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