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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
pCHi-C
1
Hi-C
1
RRBS
Assay category
3
DNA binding
1
3D chromatin structure
1
DNA methylation
Target of assay
3
control
Date released
3
June, 2019
2
July, 2019
1
February, 2021
1
May, 2021
Available data
4
bam
2
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
hdf5
Organism
7
Homo sapiens
Biosample type
67
tissue
43
in vitro differentiated cells
7
primary cell
1
stem cell
Organ
181
epithelium
154
pancreas
15
vasculature
13
blood vessel
10
vein
8
blood
8
bodily fluid
8
kidney
7
brain
7
connective tissue
3
heart
3
liver
3
musculature of body
2
eye
1
bone element
1
bone marrow
Project
6
AMP
1
T1D
Genome assembly (visualization)
34
hg19
GRCh38
Lab
6
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
pCHi-C
Hi-C
RRBS
primary cell
cardiac fibroblast
2
1
adult endothelial progenitor cell
1
brain pericyte
1
mesenchymal stem cell
1
osteoblast
1
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