Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
3
DNase-seq
3
Hi-C
2
total RNA-seq
1
FAIRE-seq
Assay category
15
DNA binding
4
DNA accessibility
3
3D chromatin structure
2
Transcription
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
15
October, 2019
4
July, 2019
3
November, 2017
1
June, 2019
1
March, 2020
Available data
23
bigWig
21
bam
16
bed narrowPeak
16
bigBed narrowPeak
7
bed broadPeak
7
bigBed broadPeak
5
bed bed3+
3
fastq
2
hdf5
2
tsv
1
bedpe bed3+
1
hic
1
tar
Organism
24
Homo sapiens
Biosample type
70
tissue
64
cell line
24
primary cell
Organ
223
epithelium
182
pancreas
34
connective tissue
30
vasculature
25
kidney
24
blood vessel
21
brain
16
vein
13
liver
12
musculature of body
10
heart
4
eye
2
adipose tissue
2
artery
1
pericardium
Project
24
AMP
Genome assembly (visualization)
24
hg19
18
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
audit script error
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
1
1
brain microvascular endothelial cell
3
1
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download